24d9103cded99965787b9ee2adddbaf5 *DESCRIPTION
f8aae127dcc6fdaf96a604f359833f7f *NAMESPACE
2d4f779d7dd27935e94781da7335eb6a *R/CdfEnv.R
630c972d179828bb31b8cf776de09370 *R/appendCdfEnvAffy.R
3c213a33242d27a0a3e54ea978b456aa *R/buildCdfEnv.biostrings.R
2167977873ec87a8e95f5b576f2f047f *R/buildCdfEnv.matchprobes.R
25115096c4bf3d005f929145a6700cdb *R/cdfenvs.R
c202d3ca1af6dada77849e0ca37610c5 *R/copyCdfEnvAffy.R
5bcc736d810b95dacc026ada63a89d2b *R/readFASTA.R
a39d8fd6ea7b43a57c072d6c429e381a *R/removeIndex.R
014e6d45240b9219f0dc9bbe300f17bc *R/unique.CdfEnvAffy.R
937ae3c808d8383fdf8eab4302925dd4 *build/vignette.rds
fb787de9457f21aeccc82923652aafc0 *data/cdfenvEx.rda
ebf92d5b4e68128d31a3e9249f0fa6b1 *inst/CITATION
0a53f074a258da10446d67b6f097aacc *inst/UnitTests/AffyProbesMatch_test.R
23c88219b41cca5c18a3118ad76fd253 *inst/doc/altcdfenvs.R
acf8b6c53ba422df216c4c956dda3513 *inst/doc/altcdfenvs.Rnw
7a934f26bb7839bb05cd57bb3f7f6dc1 *inst/doc/altcdfenvs.pdf
56059c9e040af1482ae4e66289cbfad7 *inst/doc/modify.R
48f6ceae6f5d07787409d0958942cba2 *inst/doc/modify.Rnw
d49efc032533005221ddec8f48b9e45d *inst/doc/modify.pdf
1423e166149e40b99c91194a3e68bd91 *inst/doc/ngenomeschips.R
a8ef75c14c4bc3c5ee565629183f245b *inst/doc/ngenomeschips.Rnw
7616c785d98d7a75127999f4f773cb21 *inst/doc/ngenomeschips.pdf
7499a24844858824a246ca8ef35be87d *inst/exampleData/Plasmodium-Probeset-IDs.txt
9e2e95d99c194250d94f4cc0b6f40fd4 *inst/exampleData/sample.fasta
b4571cde85de0a3298b4fecb3110406c *inst/exampleData/slamf_targets.RData
8760e3eaecf5a33901680efd0d24b781 *inst/internalData/chipspecs.tab
24e7ee02b48c4070fda2e8d3be1ea151 *man/AffyProbesMatch-class.Rd
190c943b0f75e444a48757cefcfc120c *man/CdfEnvAffy-class.Rd
35677a60633398d5271f0617fc6c14cf *man/appendCdfEnvAffy.Rd
7b9097d5d4b4b6df24ee9c0358c33d4a *man/buildCdfEnv.biostrings.Rd
951643a1848aed198beddec759e83307 *man/cdfenv.Rd
835beb07c1664dd1377239bb4fd942f2 *man/cdfenvEx.Rd
18654d4f2846298a12225b57cc7edb7a *man/copyCdfEnvAffy.Rd
2727564377fa68de567dcdb6708cfb97 *man/countduplicated.Rd
aed306c6c7497d3e8f44f40c3748e799 *man/geneNames.Rd
6ba0156252507dfe5aa806ae4d13e2ad *man/getxy.probeseq.Rd
21d8d5f4cefe4aee08063c8351ccd012 *man/index2xy.Rd
079cd1542f83b26d5a980df05e96433a *man/indexProbes.CdfEnvAffy.Rd
a759a58a25669ad65c90bdda002d6cdc *man/matchAffyProbes.Rd
93ffd8f221fa4afe61fe799330ac7736 *man/plot.CdfEnvAffy.Rd
6ac4ff5830aef991c38262a7c6458d0f *man/removeIndex.Rd
f6b600cba47a7c70bae67bc8ffdc8f0c *man/toHypergraph.Rd
fc3d1cd6c84aa2eb546344dc792eb9e6 *man/unique.CdfEnvAffy.Rd
cb5535dbe904e8b45df3efcbf0ea03f8 *man/utils.FASTA.Rd
7892cdd47dd7d01c02b953a6f57059a8 *man/validAffyBatch.Rd
acf8b6c53ba422df216c4c956dda3513 *vignettes/altcdfenvs.Rnw
48f6ceae6f5d07787409d0958942cba2 *vignettes/modify.Rnw
a8ef75c14c4bc3c5ee565629183f245b *vignettes/ngenomeschips.Rnw
